WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.1.1 Sequence Name  F11C1.1.1
Length (nt)  968   Chromosome Location  X: 12987332-12990579
Chromosome . Primary Identifier  X Chromosome Location . Start  12987332
Chromosome Location . End  12990579 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008690 F11C1.1 F11C1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.1 F11C1.1 381   X: 12987564-12987601

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.1.1 12987332 12990579 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256531   270   X: 12987332-12987601 Caenorhabditis elegans
Exon256532   113   X: 12988434-12988546 Caenorhabditis elegans
Exon256534   85   X: 12988602-12988686 Caenorhabditis elegans
Exon256536   109   X: 12989019-12989127 Caenorhabditis elegans
Exon256538   36   X: 12989173-12989208 Caenorhabditis elegans
Exon256552   355   X: 12990225-12990579 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.1.1 12987332 12990579 -1

1 Sequence

Length
968

1 Sequence Ontology Term

Identifier Name Description
transcript