WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C1.5e.1 Sequence Name  F11C1.5e.1
Length (nt)  3032   Chromosome Location  X: 12991470-12995827
Chromosome . Primary Identifier  X Chromosome Location . Start  12991470
Chromosome Location . End  12995827 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008694 vwa-8 F11C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C1.5e F11C1.5e 2925   X: 12991499-12991559

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.5e.1 12991470 12995827 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256558   90   X: 12991470-12991559 Caenorhabditis elegans
Exon256563   230   X: 12991607-12991836 Caenorhabditis elegans
Exon256566   111   X: 12992168-12992278 Caenorhabditis elegans
Exon256569   486   X: 12992326-12992811 Caenorhabditis elegans
Exon256572   117   X: 12992891-12993007 Caenorhabditis elegans
Exon256575   569   X: 12993055-12993623 Caenorhabditis elegans
Exon256578   238   X: 12994048-12994285 Caenorhabditis elegans
Exon256581   443   X: 12994341-12994783 Caenorhabditis elegans
Exon256584   100   X: 12994828-12994927 Caenorhabditis elegans
Exon256587   217   X: 12995080-12995296 Caenorhabditis elegans
Exon256590   230   X: 12995344-12995573 Caenorhabditis elegans
Exon256593   201   X: 12995627-12995827 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11C1.5e.1 12991470 12995827 1

1 Sequence

Length
3032

1 Sequence Ontology Term

Identifier Name Description
transcript