WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00200188 Gene Name  F11C1.14
Sequence Name  ? F11C1.14 Organism  Caenorhabditis elegans
Automated Description  Enriched in AVK based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 131
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00200188

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11C1.14 F11C1.14 131   X: 13014450-13014580
 

Other

0 CDSs

0 RNAi Result

10 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963581
tm8982
WBVar01602362
WBVar00083883
WBVar01954932

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00200188 13014450 13014580 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_13013965..13014449   485 X: 13013965-13014449 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts significantly enriched in AVK neurons comparing to all cell types at L1 larva stage. edgeR, FDR < 0.001, fold change > 2. WBPaper00055565:AVK_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00200188 13014450 13014580 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
131

1 Sequence Ontology Term