WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03G8.3.1 Sequence Name  R03G8.3.1
Length (nt)  2185   Chromosome Location  X: 13090965-13094416
Chromosome . Primary Identifier  X Chromosome Location . Start  13090965
Chromosome Location . End  13094416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010998 R03G8.3 R03G8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G8.3 R03G8.3 1965   X: 13091131-13091385

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.3.1 13090965 13094416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256827   15   X: 13090965-13090979 Caenorhabditis elegans
Exon256830   270   X: 13091116-13091385 Caenorhabditis elegans
Exon256831   122   X: 13091437-13091558 Caenorhabditis elegans
Exon256834   147   X: 13091603-13091749 Caenorhabditis elegans
Exon256837   96   X: 13091798-13091893 Caenorhabditis elegans
Exon256840   113   X: 13091936-13092048 Caenorhabditis elegans
Exon256843   140   X: 13092195-13092334 Caenorhabditis elegans
Exon256846   89   X: 13092382-13092470 Caenorhabditis elegans
Exon256849   250   X: 13092862-13093111 Caenorhabditis elegans
Exon256852   222   X: 13093169-13093390 Caenorhabditis elegans
Exon256855   164   X: 13093549-13093712 Caenorhabditis elegans
Exon256858   109   X: 13093760-13093868 Caenorhabditis elegans
Exon256861   96   X: 13093923-13094018 Caenorhabditis elegans
Exon256865   352   X: 13094065-13094416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.3.1 13090965 13094416 1

1 Sequence

Length
2185

1 Sequence Ontology Term

Identifier Name Description
transcript