WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03G8.3.3 Sequence Name  R03G8.3.3
Length (nt)  2113   Chromosome Location  X: 13091114-13094408
Chromosome . Primary Identifier  X Chromosome Location . Start  13091114
Chromosome Location . End  13094408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03G8.3.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010998 R03G8.3 R03G8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03G8.3 R03G8.3 1965   X: 13091131-13091385

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.3.3 13091114 13094408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256829   272   X: 13091114-13091385 Caenorhabditis elegans
Exon256833   122   X: 13091437-13091558 Caenorhabditis elegans
Exon256836   147   X: 13091603-13091749 Caenorhabditis elegans
Exon256839   96   X: 13091798-13091893 Caenorhabditis elegans
Exon256842   113   X: 13091936-13092048 Caenorhabditis elegans
Exon256845   140   X: 13092195-13092334 Caenorhabditis elegans
Exon256848   89   X: 13092382-13092470 Caenorhabditis elegans
Exon256851   250   X: 13092862-13093111 Caenorhabditis elegans
Exon256854   222   X: 13093169-13093390 Caenorhabditis elegans
Exon256857   164   X: 13093549-13093712 Caenorhabditis elegans
Exon256860   109   X: 13093760-13093868 Caenorhabditis elegans
Exon256863   96   X: 13093923-13094018 Caenorhabditis elegans
Exon256864   171   X: 13094065-13094235 Caenorhabditis elegans
Exon256867   122   X: 13094287-13094408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R03G8.3.3 13091114 13094408 1

1 Sequence

Length
2113

1 Sequence Ontology Term

Identifier Name Description
transcript