WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17H10.1.1 Sequence Name  F17H10.1.1
Length (nt)  1790   Chromosome Location  X: 13105241-13108543
Chromosome . Primary Identifier  X Chromosome Location . Start  13105241
Chromosome Location . End  13108543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17H10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008925 F17H10.1 F17H10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17H10.1 F17H10.1 1521   X: 13105290-13105324

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.1.1 13105241 13108543 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256891   84   X: 13105241-13105324 Caenorhabditis elegans
Exon256892   140   X: 13105380-13105519 Caenorhabditis elegans
Exon256893   134   X: 13105566-13105699 Caenorhabditis elegans
Exon256894   159   X: 13105742-13105900 Caenorhabditis elegans
Exon256895   237   X: 13106131-13106367 Caenorhabditis elegans
Exon256896   93   X: 13106452-13106544 Caenorhabditis elegans
Exon256897   198   X: 13106802-13106999 Caenorhabditis elegans
Exon256898   261   X: 13107153-13107413 Caenorhabditis elegans
Exon256899   82   X: 13107470-13107551 Caenorhabditis elegans
Exon256900   402   X: 13108142-13108543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.1.1 13105241 13108543 1

1 Sequence

Length
1790

1 Sequence Ontology Term

Identifier Name Description
transcript