WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17H10.3a.1 Sequence Name  F17H10.3a.1
Length (nt)  1816   Chromosome Location  X: 13116349-13122291
Chromosome . Primary Identifier  X Chromosome Location . Start  13116349
Chromosome Location . End  13122291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17H10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008927 snx-17 F17H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17H10.3a F17H10.3a 1623   X: 13116532-13116588

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.3a.1 13116349 13122291 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256922   240   X: 13116349-13116588 Caenorhabditis elegans
Exon256924   111   X: 13116648-13116758 Caenorhabditis elegans
Exon256926   138   X: 13116941-13117078 Caenorhabditis elegans
Exon256928   141   X: 13117125-13117265 Caenorhabditis elegans
Exon256930   141   X: 13117313-13117453 Caenorhabditis elegans
Exon256932   172   X: 13117640-13117811 Caenorhabditis elegans
Exon256935   100   X: 13117860-13117959 Caenorhabditis elegans
Exon256937   130   X: 13118013-13118142 Caenorhabditis elegans
Exon256939   111   X: 13118472-13118582 Caenorhabditis elegans
Exon256941   65   X: 13118636-13118700 Caenorhabditis elegans
Exon256943   196   X: 13118746-13118941 Caenorhabditis elegans
Exon256946   135   X: 13119081-13119215 Caenorhabditis elegans
Exon256949   136   X: 13122156-13122291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.3a.1 13116349 13122291 -1

1 Sequence

Length
1816

1 Sequence Ontology Term

Identifier Name Description
transcript