WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09A5.4a.1 Sequence Name  F09A5.4a.1
Length (nt)  1598   Chromosome Location  X: 13152820-13158543
Chromosome . Primary Identifier  X Chromosome Location . Start  13152820
Chromosome Location . End  13158543 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09A5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008601 mob-2 F09A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09A5.4a F09A5.4a 903   X: 13153443-13153610

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09A5.4a.1 13152820 13158543 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257028   791   X: 13152820-13153610 Caenorhabditis elegans
Exon257036   221   X: 13154178-13154398 Caenorhabditis elegans
Exon257044   286   X: 13154576-13154861 Caenorhabditis elegans
Exon257053   169   X: 13155310-13155478 Caenorhabditis elegans
Exon257066   131   X: 13158413-13158543 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09A5.4a.1 13152820 13158543 -1

1 Sequence

Length
1598

1 Sequence Ontology Term

Identifier Name Description
transcript