WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48C11.2a Sequence Name  F48C11.2a
Length (nt)  2040   Chromosome Location  X: 13182463-13182540
Chromosome . Primary Identifier  X Chromosome Location . Start  13182463
Chromosome Location . End  13182540
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C11.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53348 CWP-5, isoform a 71.6 679 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047733
WBRNAi00015239
WBRNAi00082850

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48C11.2a 13182463 13182540 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009844 cwp-5 F48C11.2 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48C11.2a 13182463 13182540 -1
CDS:F48C11.2a 13183248 13183437 -1
CDS:F48C11.2a 13183498 13183569 -1
CDS:F48C11.2a 13183613 13183699 -1
CDS:F48C11.2a 13183767 13183820 -1
CDS:F48C11.2a 13183881 13184283 -1
CDS:F48C11.2a 13184478 13184576 -1
CDS:F48C11.2a 13184714 13184847 -1
CDS:F48C11.2a 13184975 13185443 -1
CDS:F48C11.2a 13185501 13185600 -1
CDS:F48C11.2a 13186113 13186423 -1
CDS:F48C11.2a 13189919 13189961 -1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48C11.2a.1 F48C11.2a.1 2389   X: 13182114-13189961