WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F48C11.1 Sequence Name  F48C11.1
Length (nt)  1095   Chromosome Location  X: 13191246-13191293
Chromosome . Primary Identifier  X Chromosome Location . Start  13191246
Chromosome Location . End  13191293
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20829 GPA-6 42.0 364 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047732
WBRNAi00015238
WBRNAi00032477

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F48C11.1 13191246 13191293 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001668 gpa-6 F48C11.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F48C11.1 13191246 13191293 1
CDS:F48C11.1 13191347 13191483 1
CDS:F48C11.1 13191699 13191837 1
CDS:F48C11.1 13191894 13192063 1
CDS:F48C11.1 13192111 13192239 1
CDS:F48C11.1 13193005 13193134 1
CDS:F48C11.1 13193182 13193335 1
CDS:F48C11.1 13193381 13193502 1
CDS:F48C11.1 13193890 13193955 1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F48C11.1.1 F48C11.1.1 1564   X: 13191212-13194390