WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R12H7.1a Sequence Name  R12H7.1a
Length (nt)  1161   Chromosome Location  X: 13212432-13212543
Chromosome . Primary Identifier  X Chromosome Location . Start  13212432
Chromosome Location . End  13212543
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R12H7.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28246 UNC-9, isoform a 45.2 386 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00089762
WBRNAi00051863
WBRNAi00027706
WBRNAi00090277
WBRNAi00089959
WBRNAi00090119
WBRNAi00101970
WBRNAi00101969
WBRNAi00101971

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R12H7.1a 13212432 13212543 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006749 unc-9 R12H7.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R12H7.1a 13212432 13212543 1
CDS:R12H7.1a 13212973 13213008 1
CDS:R12H7.1a 13213061 13213211 1
CDS:R12H7.1a 13213263 13213354 1
CDS:R12H7.1a 13213842 13213969 1
CDS:R12H7.1a 13214417 13214835 1
CDS:R12H7.1a 13214956 13215055 1
CDS:R12H7.1a 13215705 13215827 1

1 Sequence

Length
1161

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R12H7.1a.2 R12H7.1a.2 2189   X: 13201770-13216729
Transcript:R12H7.1a.1 R12H7.1a.1 2105   X: 13212390-13216729