WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10E9.3.1 Sequence Name  T10E9.3.1
Length (nt)  1949   Chromosome Location  I: 6534084-6539193
Chromosome . Primary Identifier  I Chromosome Location . Start  6534084
Chromosome Location . End  6539193 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10E9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020413 cpg-22 T10E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10E9.3 T10E9.3 1752   I: 6534117-6534191

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.3.1 6534084 6539193 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16546   108   I: 6534084-6534191 Caenorhabditis elegans
Exon16549   138   I: 6536131-6536268 Caenorhabditis elegans
Exon16550   148   I: 6536312-6536459 Caenorhabditis elegans
Exon16551   56   I: 6536571-6536626 Caenorhabditis elegans
Exon16552   130   I: 6536673-6536802 Caenorhabditis elegans
Exon16553   104   I: 6536849-6536952 Caenorhabditis elegans
Exon16554   270   I: 6537297-6537566 Caenorhabditis elegans
Exon16555   484   I: 6537641-6538124 Caenorhabditis elegans
Exon16556   257   I: 6538173-6538429 Caenorhabditis elegans
Exon16557   254   I: 6538940-6539193 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10E9.3.1 6534084 6539193 1

1 Sequence

Length
1949

1 Sequence Ontology Term

Identifier Name Description
transcript