WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08H2.9.1 Sequence Name  K08H2.9.1
Length (nt)  1417   Chromosome Location  X: 13228502-13232359
Chromosome . Primary Identifier  X Chromosome Location . Start  13228502
Chromosome Location . End  13232359 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08H2.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010694 bgnt-1.5 K08H2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08H2.9 K08H2.9 1212   X: 13228669-13228747

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08H2.9.1 13228502 13232359 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257162   246   X: 13228502-13228747 Caenorhabditis elegans
Exon257163   137   X: 13228799-13228935 Caenorhabditis elegans
Exon257164   94   X: 13228985-13229078 Caenorhabditis elegans
Exon257165   117   X: 13229124-13229240 Caenorhabditis elegans
Exon257166   72   X: 13229290-13229361 Caenorhabditis elegans
Exon257167   205   X: 13231055-13231259 Caenorhabditis elegans
Exon257168   103   X: 13231305-13231407 Caenorhabditis elegans
Exon257169   193   X: 13231825-13232017 Caenorhabditis elegans
Exon257170   128   X: 13232064-13232191 Caenorhabditis elegans
Exon257171   122   X: 13232238-13232359 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08H2.9.1 13228502 13232359 -1

1 Sequence

Length
1417

1 Sequence Ontology Term

Identifier Name Description
transcript