WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08H2.8.1 Sequence Name  K08H2.8.1
Length (nt)  1542   Chromosome Location  X: 13251964-13256284
Chromosome . Primary Identifier  X Chromosome Location . Start  13251964
Chromosome Location . End  13256284 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08H2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003626 nhr-32 K08H2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08H2.8 K08H2.8 1245   X: 13251976-13252027

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08H2.8.1 13251964 13256284 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257197   64   X: 13251964-13252027 Caenorhabditis elegans
Exon257198   147   X: 13252231-13252377 Caenorhabditis elegans
Exon257199   155   X: 13253469-13253623 Caenorhabditis elegans
Exon257200   78   X: 13253672-13253749 Caenorhabditis elegans
Exon257201   267   X: 13253887-13254153 Caenorhabditis elegans
Exon257202   84   X: 13254198-13254281 Caenorhabditis elegans
Exon257203   92   X: 13254335-13254426 Caenorhabditis elegans
Exon257204   268   X: 13254895-13255162 Caenorhabditis elegans
Exon257205   387   X: 13255898-13256284 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08H2.8.1 13251964 13256284 1

1 Sequence

Length
1542

1 Sequence Ontology Term

Identifier Name Description
transcript