WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04D3.1.1 Sequence Name  R04D3.1.1
Length (nt)  1549   Chromosome Location  X: 13282043-13284197
Chromosome . Primary Identifier  X Chromosome Location . Start  13282043
Chromosome Location . End  13284197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011009 cyp-14A4 R04D3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04D3.1 R04D3.1 1476   X: 13282096-13282302

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.1.1 13282043 13284197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257261   260   X: 13282043-13282302 Caenorhabditis elegans
Exon257262   158   X: 13282354-13282511 Caenorhabditis elegans
Exon257263   260   X: 13282558-13282817 Caenorhabditis elegans
Exon257264   125   X: 13282931-13283055 Caenorhabditis elegans
Exon257265   464   X: 13283106-13283569 Caenorhabditis elegans
Exon257268   136   X: 13283870-13284005 Caenorhabditis elegans
Exon257269   146   X: 13284052-13284197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.1.1 13282043 13284197 -1

1 Sequence

Length
1549

1 Sequence Ontology Term

Identifier Name Description
transcript