WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B10.3b.1 Sequence Name  F57B10.3b.1
Length (nt)  1738   Chromosome Location  I: 6570087-6572600
Chromosome . Primary Identifier  I Chromosome Location . Start  6570087
Chromosome Location . End  6572600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019001 ipgm-1 F57B10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B10.3b F57B10.3b 1566   I: 6570089-6570224

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.3b.1 6570087 6572600 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16684   138   I: 6570087-6570224 Caenorhabditis elegans
Exon16686   155   I: 6570274-6570428 Caenorhabditis elegans
Exon16688   106   I: 6570476-6570581 Caenorhabditis elegans
Exon16690   148   I: 6570629-6570776 Caenorhabditis elegans
Exon16692   127   I: 6570978-6571104 Caenorhabditis elegans
Exon16694   435   I: 6571376-6571810 Caenorhabditis elegans
Exon16696   348   I: 6571854-6572201 Caenorhabditis elegans
Exon16698   281   I: 6572320-6572600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B10.3b.1 6570087 6572600 1

1 Sequence

Length
1738

1 Sequence Ontology Term

Identifier Name Description
transcript