WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04D3.2.1 Sequence Name  R04D3.2.1
Length (nt)  1370   Chromosome Location  X: 13285121-13286633
Chromosome . Primary Identifier  X Chromosome Location . Start  13285121
Chromosome Location . End  13286633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011010 R04D3.2 R04D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04D3.2 R04D3.2 1221   X: 13285267-13285527

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.2.1 13285121 13286633 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257273   407   X: 13285121-13285527 Caenorhabditis elegans
Exon257274   636   X: 13285584-13286219 Caenorhabditis elegans
Exon257275   327   X: 13286307-13286633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.2.1 13285121 13286633 -1

1 Sequence

Length
1370

1 Sequence Ontology Term

Identifier Name Description
transcript