WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04D3.6.1 Sequence Name  R04D3.6.1
Length (nt)  1023   Chromosome Location  X: 13293361-13294769
Chromosome . Primary Identifier  X Chromosome Location . Start  13293361
Chromosome Location . End  13294769 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005114 srd-36 R04D3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04D3.6 R04D3.6 969   X: 13293415-13293663

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.6.1 13293361 13294769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257290   303   X: 13293361-13293663 Caenorhabditis elegans
Exon257291   79   X: 13293707-13293785 Caenorhabditis elegans
Exon257292   206   X: 13294003-13294208 Caenorhabditis elegans
Exon257293   138   X: 13294258-13294395 Caenorhabditis elegans
Exon257294   297   X: 13294473-13294769 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.6.1 13293361 13294769 -1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
transcript