WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04D3.8 Sequence Name  R04D3.8
Length (nt)  975   Chromosome Location  X: 13298994-13299184
Chromosome . Primary Identifier  X Chromosome Location . Start  13298994
Chromosome Location . End  13299184
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51446 SRD-39 36.9 324 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051242
WBRNAi00017405

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04D3.8 13298994 13299184 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005117 srd-39 R04D3.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04D3.8 13298994 13299184 -1
CDS:R04D3.8 13299232 13299310 -1
CDS:R04D3.8 13299358 13299433 -1
CDS:R04D3.8 13299481 13299674 -1
CDS:R04D3.8 13300089 13300523 -1

1 Sequence

Length
975

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04D3.8.1 R04D3.8.1 1186   X: 13298863-13300603