WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04D3.9.1 Sequence Name  R04D3.9.1
Length (nt)  963   Chromosome Location  X: 13303905-13305844
Chromosome . Primary Identifier  X Chromosome Location . Start  13303905
Chromosome Location . End  13305844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005121 srd-43 R04D3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04D3.9 R04D3.9 963   X: 13303905-13304092

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.9.1 13303905 13305844 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257307   188   X: 13303905-13304092 Caenorhabditis elegans
Exon257308   79   X: 13304138-13304216 Caenorhabditis elegans
Exon257309   76   X: 13304264-13304339 Caenorhabditis elegans
Exon257310   197   X: 13304981-13305177 Caenorhabditis elegans
Exon257311   138   X: 13305374-13305511 Caenorhabditis elegans
Exon257312   285   X: 13305560-13305844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.9.1 13303905 13305844 -1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
transcript