WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R04D3.10.1 Sequence Name  R04D3.10.1
Length (nt)  1129   Chromosome Location  X: 13307152-13308845
Chromosome . Primary Identifier  X Chromosome Location . Start  13307152
Chromosome Location . End  13308845 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04D3.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011013 srxa-8 R04D3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R04D3.10 R04D3.10 999   X: 13307282-13307485

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.10.1 13307152 13308845 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257314   334   X: 13307152-13307485 Caenorhabditis elegans
Exon257315   161   X: 13307543-13307703 Caenorhabditis elegans
Exon257316   133   X: 13307753-13307885 Caenorhabditis elegans
Exon257318   278   X: 13308244-13308521 Caenorhabditis elegans
Exon257319   114   X: 13308576-13308689 Caenorhabditis elegans
Exon257320   109   X: 13308737-13308845 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R04D3.10.1 13307152 13308845 -1

1 Sequence

Length
1129

1 Sequence Ontology Term

Identifier Name Description
transcript