WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46G10.2.1 Sequence Name  F46G10.2.1
Length (nt)  2396   Chromosome Location  X: 13322963-13327824
Chromosome . Primary Identifier  X Chromosome Location . Start  13322963
Chromosome Location . End  13327824 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46G10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009797 F46G10.2 F46G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46G10.2 F46G10.2 1824   X: 13323159-13323419

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.2.1 13322963 13327824 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257332   457   X: 13322963-13323419 Caenorhabditis elegans
Exon257333   258   X: 13323973-13324230 Caenorhabditis elegans
Exon257334   94   X: 13324284-13324377 Caenorhabditis elegans
Exon257335   65   X: 13324567-13324631 Caenorhabditis elegans
Exon257336   99   X: 13324944-13325042 Caenorhabditis elegans
Exon257337   72   X: 13325348-13325419 Caenorhabditis elegans
Exon257338   102   X: 13325462-13325563 Caenorhabditis elegans
Exon257339   223   X: 13325928-13326150 Caenorhabditis elegans
Exon257340   188   X: 13326193-13326380 Caenorhabditis elegans
Exon257341   375   X: 13326428-13326802 Caenorhabditis elegans
Exon257342   463   X: 13327362-13327824 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.2.1 13322963 13327824 1

1 Sequence

Length
2396

1 Sequence Ontology Term

Identifier Name Description
transcript