WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46G10.7c.1 Sequence Name  F46G10.7c.1
Length (nt)  885   Chromosome Location  X: 13328350-13331102
Chromosome . Primary Identifier  X Chromosome Location . Start  13328350
Chromosome Location . End  13331102 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46G10.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004801 sir-2.2 F46G10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46G10.7c F46G10.7c 885   X: 13328350-13328362

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.7c.1 13328350 13331102 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257345   13   X: 13328350-13328362 Caenorhabditis elegans
Exon257349   129   X: 13329262-13329390 Caenorhabditis elegans
Exon257353   109   X: 13329434-13329542 Caenorhabditis elegans
Exon257360   141   X: 13329760-13329900 Caenorhabditis elegans
Exon257365   81   X: 13329944-13330024 Caenorhabditis elegans
Exon257370   115   X: 13330484-13330598 Caenorhabditis elegans
Exon257375   183   X: 13330645-13330827 Caenorhabditis elegans
Exon257376   114   X: 13330989-13331102 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.7c.1 13328350 13331102 1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
transcript