WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.9b.2 Sequence Name  ZC581.9b.2
Length (nt)  2596   Chromosome Location  I: 6665089-6673653
Chromosome . Primary Identifier  I Chromosome Location . Start  6665089
Chromosome Location . End  6673653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.9b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022635 ZC581.9 ZC581.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.9b ZC581.9b 2370   I: 6665225-6665396

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9b.2 6665089 6673653 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16892   308   I: 6665089-6665396 Caenorhabditis elegans
Exon16898   610   I: 6665915-6666524 Caenorhabditis elegans
Exon16904   247   I: 6666729-6666975 Caenorhabditis elegans
Exon16910   123   I: 6667028-6667150 Caenorhabditis elegans
Exon16917   252   I: 6667358-6667609 Caenorhabditis elegans
Exon16923   239   I: 6667944-6668182 Caenorhabditis elegans
Exon16929   160   I: 6668429-6668588 Caenorhabditis elegans
Exon16935   138   I: 6668725-6668862 Caenorhabditis elegans
Exon16941   178   I: 6668912-6669089 Caenorhabditis elegans
Exon16949   95   I: 6669839-6669933 Caenorhabditis elegans
Exon16955   165   I: 6669977-6670141 Caenorhabditis elegans
Exon16961   81   I: 6673573-6673653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9b.2 6665089 6673653 -1

1 Sequence

Length
2596

1 Sequence Ontology Term

Identifier Name Description
transcript