WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.9b.1 Sequence Name  ZC581.9b.1
Length (nt)  2635   Chromosome Location  I: 6665118-6673830
Chromosome . Primary Identifier  I Chromosome Location . Start  6665118
Chromosome Location . End  6673830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022635 ZC581.9 ZC581.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.9b ZC581.9b 2370   I: 6665225-6665396

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9b.1 6665118 6673830 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16893   279   I: 6665118-6665396 Caenorhabditis elegans
Exon16897   610   I: 6665915-6666524 Caenorhabditis elegans
Exon16903   247   I: 6666729-6666975 Caenorhabditis elegans
Exon16909   123   I: 6667028-6667150 Caenorhabditis elegans
Exon16916   252   I: 6667358-6667609 Caenorhabditis elegans
Exon16922   239   I: 6667944-6668182 Caenorhabditis elegans
Exon16928   160   I: 6668429-6668588 Caenorhabditis elegans
Exon16934   138   I: 6668725-6668862 Caenorhabditis elegans
Exon16940   178   I: 6668912-6669089 Caenorhabditis elegans
Exon16948   95   I: 6669839-6669933 Caenorhabditis elegans
Exon16954   165   I: 6669977-6670141 Caenorhabditis elegans
Exon16963   149   I: 6673682-6673830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9b.1 6665118 6673830 -1

1 Sequence

Length
2635

1 Sequence Ontology Term

Identifier Name Description
transcript