WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.9d.1 Sequence Name  ZC581.9d.1
Length (nt)  2409   Chromosome Location  I: 6665225-6673602
Chromosome . Primary Identifier  I Chromosome Location . Start  6665225
Chromosome Location . End  6673602 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.9d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022635 ZC581.9 ZC581.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.9d ZC581.9d 2409   I: 6665225-6665396

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9d.1 6665225 6673602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16894   172   I: 6665225-6665396 Caenorhabditis elegans
Exon16901   610   I: 6665915-6666524 Caenorhabditis elegans
Exon16907   247   I: 6666729-6666975 Caenorhabditis elegans
Exon16913   123   I: 6667028-6667150 Caenorhabditis elegans
Exon16920   252   I: 6667358-6667609 Caenorhabditis elegans
Exon16926   239   I: 6667944-6668182 Caenorhabditis elegans
Exon16932   160   I: 6668429-6668588 Caenorhabditis elegans
Exon16938   138   I: 6668725-6668862 Caenorhabditis elegans
Exon16944   178   I: 6668912-6669089 Caenorhabditis elegans
Exon16952   95   I: 6669839-6669933 Caenorhabditis elegans
Exon16957   165   I: 6669977-6670141 Caenorhabditis elegans
Exon16960   30   I: 6673573-6673602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9d.1 6665225 6673602 -1

1 Sequence

Length
2409

1 Sequence Ontology Term

Identifier Name Description
transcript