WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC581.9c.1 Sequence Name  ZC581.9c.1
Length (nt)  2505   Chromosome Location  I: 6665225-6673807
Chromosome . Primary Identifier  I Chromosome Location . Start  6665225
Chromosome Location . End  6673807 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC581.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022635 ZC581.9 ZC581.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC581.9c ZC581.9c 2505   I: 6665225-6665396

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9c.1 6665225 6673807 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon16895   172   I: 6665225-6665396 Caenorhabditis elegans
Exon16900   610   I: 6665915-6666524 Caenorhabditis elegans
Exon16906   247   I: 6666729-6666975 Caenorhabditis elegans
Exon16912   123   I: 6667028-6667150 Caenorhabditis elegans
Exon16919   252   I: 6667358-6667609 Caenorhabditis elegans
Exon16925   239   I: 6667944-6668182 Caenorhabditis elegans
Exon16931   160   I: 6668429-6668588 Caenorhabditis elegans
Exon16937   138   I: 6668725-6668862 Caenorhabditis elegans
Exon16943   178   I: 6668912-6669089 Caenorhabditis elegans
Exon16951   95   I: 6669839-6669933 Caenorhabditis elegans
Exon16956   165   I: 6669977-6670141 Caenorhabditis elegans
Exon16962   126   I: 6673682-6673807 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC581.9c.1 6665225 6673807 -1

1 Sequence

Length
2505

1 Sequence Ontology Term

Identifier Name Description
transcript