WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F7.6a.1 Sequence Name  C29F7.6a.1
Length (nt)  2612   Chromosome Location  X: 13436422-13441438
Chromosome . Primary Identifier  X Chromosome Location . Start  13436422
Chromosome Location . End  13441438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F7.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007813 jmjd-3.3 C29F7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F7.6a C29F7.6a 2262   X: 13436454-13436622

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.6a.1 13436422 13441438 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257594   201   X: 13436422-13436622 Caenorhabditis elegans
Exon257595   233   X: 13436831-13437063 Caenorhabditis elegans
Exon257596   796   X: 13438149-13438944 Caenorhabditis elegans
Exon257597   203   X: 13439321-13439523 Caenorhabditis elegans
Exon257599   584   X: 13439973-13440556 Caenorhabditis elegans
Exon257601   210   X: 13440798-13441007 Caenorhabditis elegans
Exon257604   385   X: 13441054-13441438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.6a.1 13436422 13441438 1

1 Sequence

Length
2612

1 Sequence Ontology Term

Identifier Name Description
transcript