WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H06A10.1.1 Sequence Name  H06A10.1.1
Length (nt)  1196   Chromosome Location  X: 13507533-13510120
Chromosome . Primary Identifier  X Chromosome Location . Start  13507533
Chromosome Location . End  13510120 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H06A10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010368 H06A10.1 H06A10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H06A10.1 H06A10.1 876   X: 13507712-13507757

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H06A10.1.1 13507533 13510120 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257735   225   X: 13507533-13507757 Caenorhabditis elegans
Exon257736   129   X: 13507812-13507940 Caenorhabditis elegans
Exon257737   106   X: 13508982-13509087 Caenorhabditis elegans
Exon257738   106   X: 13509132-13509237 Caenorhabditis elegans
Exon257739   178   X: 13509292-13509469 Caenorhabditis elegans
Exon257740   88   X: 13509622-13509709 Caenorhabditis elegans
Exon257741   364   X: 13509757-13510120 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H06A10.1.1 13507533 13510120 1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript