WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01E6.1.1 Sequence Name  R01E6.1.1
Length (nt)  3403   Chromosome Location  X: 13544729-13550990
Chromosome . Primary Identifier  X Chromosome Location . Start  13544729
Chromosome Location . End  13550990 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01E6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003848 odr-1 R01E6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01E6.1 R01E6.1 3144   X: 13544822-13544946

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.1.1 13544729 13550990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257826   218   X: 13544729-13544946 Caenorhabditis elegans
Exon257827   226   X: 13545349-13545574 Caenorhabditis elegans
Exon257828   147   X: 13545620-13545766 Caenorhabditis elegans
Exon257829   69   X: 13545815-13545883 Caenorhabditis elegans
Exon257830   124   X: 13545930-13546053 Caenorhabditis elegans
Exon257831   141   X: 13546554-13546694 Caenorhabditis elegans
Exon257832   169   X: 13546743-13546911 Caenorhabditis elegans
Exon257833   192   X: 13546963-13547154 Caenorhabditis elegans
Exon257834   175   X: 13547391-13547565 Caenorhabditis elegans
Exon257835   72   X: 13547617-13547688 Caenorhabditis elegans
Exon257836   291   X: 13547741-13548031 Caenorhabditis elegans
Exon257837   82   X: 13548086-13548167 Caenorhabditis elegans
Exon257838   73   X: 13548360-13548432 Caenorhabditis elegans
Exon257839   94   X: 13548476-13548569 Caenorhabditis elegans
Exon257840   152   X: 13548868-13549019 Caenorhabditis elegans
Exon257841   124   X: 13549117-13549240 Caenorhabditis elegans
Exon257842   72   X: 13549498-13549569 Caenorhabditis elegans
Exon257843   173   X: 13549617-13549789 Caenorhabditis elegans
Exon257845   97   X: 13549857-13549953 Caenorhabditis elegans
Exon257846   75   X: 13550000-13550074 Caenorhabditis elegans
Exon257847   307   X: 13550122-13550428 Caenorhabditis elegans
Exon257848   330   X: 13550661-13550990 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.1.1 13544729 13550990 -1

1 Sequence

Length
3403

1 Sequence Ontology Term

Identifier Name Description
transcript