WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R01E6.1 Sequence Name  R01E6.1
Length (nt)  3144   Chromosome Location  X: 13544822-13544946
Chromosome . Primary Identifier  X Chromosome Location . Start  13544822
Chromosome Location . End  13544946
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01E6.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53559 ODR-1 118.6 1047 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00067903
WBRNAi00051094
WBRNAi00017292

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R01E6.1 13544822 13544946 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003848 odr-1 R01E6.1 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:R01E6.1 13544822 13544946 -1
CDS:R01E6.1 13545349 13545574 -1
CDS:R01E6.1 13545620 13545766 -1
CDS:R01E6.1 13545815 13545883 -1
CDS:R01E6.1 13545930 13546053 -1
CDS:R01E6.1 13546554 13546694 -1
CDS:R01E6.1 13546743 13546911 -1
CDS:R01E6.1 13546963 13547154 -1
CDS:R01E6.1 13547391 13547565 -1
CDS:R01E6.1 13547617 13547688 -1
CDS:R01E6.1 13547741 13548031 -1
CDS:R01E6.1 13548086 13548167 -1
CDS:R01E6.1 13548360 13548432 -1
CDS:R01E6.1 13548476 13548569 -1
CDS:R01E6.1 13548868 13549019 -1
CDS:R01E6.1 13549117 13549240 -1
CDS:R01E6.1 13549498 13549569 -1
CDS:R01E6.1 13549617 13549789 -1
CDS:R01E6.1 13549857 13549953 -1
CDS:R01E6.1 13550000 13550074 -1
CDS:R01E6.1 13550122 13550428 -1
CDS:R01E6.1 13550661 13550824 -1

1 Sequence

Length
3144

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R01E6.1.1 R01E6.1.1 3403   X: 13544729-13550990