WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01E6.2.1 Sequence Name  R01E6.2.1
Length (nt)  728   Chromosome Location  X: 13565486-13566536
Chromosome . Primary Identifier  X Chromosome Location . Start  13565486
Chromosome Location . End  13566536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01E6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010968 R01E6.2 R01E6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01E6.2 R01E6.2 498   X: 13565617-13565676

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.2.1 13565486 13566536 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257862   191   X: 13565486-13565676 Caenorhabditis elegans
Exon257863   99   X: 13565726-13565824 Caenorhabditis elegans
Exon257864   144   X: 13565872-13566015 Caenorhabditis elegans
Exon257865   102   X: 13566063-13566164 Caenorhabditis elegans
Exon257866   85   X: 13566226-13566310 Caenorhabditis elegans
Exon257867   107   X: 13566430-13566536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.2.1 13565486 13566536 -1

1 Sequence

Length
728

1 Sequence Ontology Term

Identifier Name Description
transcript