WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H27M09.1.1 Sequence Name  H27M09.1.1
Length (nt)  1978   Chromosome Location  I: 6851372-6854140
Chromosome . Primary Identifier  I Chromosome Location . Start  6851372
Chromosome Location . End  6854140 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H27M09.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019245 sacy-1 H27M09.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H27M09.1 H27M09.1 1893   I: 6851381-6851548

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.1.1 6851372 6854140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17360   177   I: 6851372-6851548 Caenorhabditis elegans
Exon17361   160   I: 6851595-6851754 Caenorhabditis elegans
Exon17362   130   I: 6851884-6852013 Caenorhabditis elegans
Exon17363   213   I: 6852091-6852303 Caenorhabditis elegans
Exon17364   154   I: 6852351-6852504 Caenorhabditis elegans
Exon17365   137   I: 6852622-6852758 Caenorhabditis elegans
Exon17366   73   I: 6852804-6852876 Caenorhabditis elegans
Exon17367   174   I: 6852925-6853098 Caenorhabditis elegans
Exon17368   119   I: 6853228-6853346 Caenorhabditis elegans
Exon17369   248   I: 6853409-6853656 Caenorhabditis elegans
Exon17370   197   I: 6853701-6853897 Caenorhabditis elegans
Exon17371   196   I: 6853945-6854140 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H27M09.1.1 6851372 6854140 1

1 Sequence

Length
1978

1 Sequence Ontology Term

Identifier Name Description
transcript