WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54B11.3a Sequence Name  F54B11.3a
Length (nt)  3336   Chromosome Location  X: 13584780-13584976
Chromosome . Primary Identifier  X Chromosome Location . Start  13584780
Chromosome Location . End  13584976
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28236 UNC-84, isoform a 125.8 1111 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00089757
WBRNAi00000280
WBRNAi00048220
WBRNAi00048221
WBRNAi00027364
WBRNAi00015566
WBRNAi00025606
WBRNAi00025607
WBRNAi00032736
WBRNAi00001560
WBRNAi00085300
WBRNAi00089940
WBRNAi00090100
WBRNAi00090258
WBRNAi00097404

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54B11.3a 13584780 13584976 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006816 unc-84 F54B11.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54B11.3a 13584780 13584976 1
CDS:F54B11.3a 13585471 13585751 1
CDS:F54B11.3a 13585804 13586632 1
CDS:F54B11.3a 13586692 13587134 1
CDS:F54B11.3a 13587193 13587456 1
CDS:F54B11.3a 13587937 13588092 1
CDS:F54B11.3a 13588144 13588601 1
CDS:F54B11.3a 13588677 13588997 1
CDS:F54B11.3a 13589050 13589322 1
CDS:F54B11.3a 13589383 13589496 1

1 Sequence

Length
3336

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54B11.3a.1 F54B11.3a.1 3666   X: 13584775-13589821