WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.8.1 Sequence Name  F54B11.8.1
Length (nt)  1198   Chromosome Location  X: 13602223-13603926
Chromosome . Primary Identifier  X Chromosome Location . Start  13602223
Chromosome Location . End  13603926 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010031 F54B11.8 F54B11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.8 F54B11.8 426   X: 13602987-13603130

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.8.1 13602223 13603926 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257939   908   X: 13602223-13603130 Caenorhabditis elegans
Exon257940   104   X: 13603179-13603282 Caenorhabditis elegans
Exon257941   102   X: 13603678-13603779 Caenorhabditis elegans
Exon257942   84   X: 13603843-13603926 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.8.1 13602223 13603926 -1

1 Sequence

Length
1198

1 Sequence Ontology Term

Identifier Name Description
transcript