WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.9.1 Sequence Name  F54B11.9.1
Length (nt)  1022   Chromosome Location  X: 13605567-13608528
Chromosome . Primary Identifier  X Chromosome Location . Start  13605567
Chromosome Location . End  13608528 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010032 F54B11.9 F54B11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.9 F54B11.9 654   X: 13605649-13605654

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.9.1 13605567 13608528 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257943   88   X: 13605567-13605654 Caenorhabditis elegans
Exon257944   78   X: 13606897-13606974 Caenorhabditis elegans
Exon257945   78   X: 13607247-13607324 Caenorhabditis elegans
Exon257946   220   X: 13607373-13607592 Caenorhabditis elegans
Exon257947   71   X: 13607637-13607707 Caenorhabditis elegans
Exon257948   487   X: 13608042-13608528 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.9.1 13605567 13608528 1

1 Sequence

Length
1022

1 Sequence Ontology Term

Identifier Name Description
transcript