WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10B11.2.1 Sequence Name  T10B11.2.1
Length (nt)  1773   Chromosome Location  I: 6931138-6936928
Chromosome . Primary Identifier  I Chromosome Location . Start  6931138
Chromosome Location . End  6936928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10B11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020398 cerk-1 T10B11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10B11.2 T10B11.2 1650   I: 6931160-6931235

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.2.1 6931138 6936928 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon17607   98   I: 6931138-6931235 Caenorhabditis elegans
Exon17608   151   I: 6931362-6931512 Caenorhabditis elegans
Exon17609   100   I: 6934173-6934272 Caenorhabditis elegans
Exon17610   148   I: 6934345-6934492 Caenorhabditis elegans
Exon17611   86   I: 6934538-6934623 Caenorhabditis elegans
Exon17612   126   I: 6934761-6934886 Caenorhabditis elegans
Exon17615   370   I: 6935319-6935688 Caenorhabditis elegans
Exon17616   136   I: 6935736-6935871 Caenorhabditis elegans
Exon17617   107   I: 6936274-6936380 Caenorhabditis elegans
Exon17618   101   I: 6936427-6936527 Caenorhabditis elegans
Exon17619   350   I: 6936579-6936928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10B11.2.1 6931138 6936928 1

1 Sequence

Length
1773

1 Sequence Ontology Term

Identifier Name Description
transcript