WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.2b.1 Sequence Name  K11E4.2b.1
Length (nt)  636   Chromosome Location  X: 13717605-13719219
Chromosome . Primary Identifier  X Chromosome Location . Start  13717605
Chromosome Location . End  13719219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010774 shc-3 K11E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.2b K11E4.2b 528   X: 13717639-13717728

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.2b.1 13717605 13719219 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258250   124   X: 13717605-13717728 Caenorhabditis elegans
Exon258255   168   X: 13718618-13718785 Caenorhabditis elegans
Exon258257   113   X: 13718829-13718941 Caenorhabditis elegans
Exon258258   231   X: 13718989-13719219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.2b.1 13717605 13719219 1

1 Sequence

Length
636

1 Sequence Ontology Term

Identifier Name Description
transcript