WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.4b.1 Sequence Name  K11E4.4b.1
Length (nt)  1353   Chromosome Location  X: 13727302-13729795
Chromosome . Primary Identifier  X Chromosome Location . Start  13727302
Chromosome Location . End  13729795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010776 pix-1 K11E4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.4b K11E4.4b 1353   X: 13727302-13727373

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.4b.1 13727302 13729795 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258277   72   X: 13727302-13727373 Caenorhabditis elegans
Exon258279   127   X: 13727484-13727610 Caenorhabditis elegans
Exon258281   45   X: 13727655-13727699 Caenorhabditis elegans
Exon258283   136   X: 13727752-13727887 Caenorhabditis elegans
Exon258285   96   X: 13728281-13728376 Caenorhabditis elegans
Exon258287   123   X: 13728421-13728543 Caenorhabditis elegans
Exon258289   130   X: 13728598-13728727 Caenorhabditis elegans
Exon258291   60   X: 13728971-13729030 Caenorhabditis elegans
Exon258293   155   X: 13729119-13729273 Caenorhabditis elegans
Exon258295   131   X: 13729321-13729451 Caenorhabditis elegans
Exon258297   278   X: 13729518-13729795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.4b.1 13727302 13729795 1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
transcript