WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.5a.1 Sequence Name  K11E4.5a.1
Length (nt)  2297   Chromosome Location  X: 13747315-13751797
Chromosome . Primary Identifier  X Chromosome Location . Start  13747315
Chromosome Location . End  13751797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003661 nhr-71 K11E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.5a K11E4.5a 1737   X: 13747447-13747470

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.5a.1 13747315 13751797 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258308   156   X: 13747315-13747470 Caenorhabditis elegans
Exon258310   102   X: 13747855-13747956 Caenorhabditis elegans
Exon258313   109   X: 13748589-13748697 Caenorhabditis elegans
Exon258314   299   X: 13748791-13749089 Caenorhabditis elegans
Exon258316   336   X: 13749409-13749744 Caenorhabditis elegans
Exon258318   107   X: 13749792-13749898 Caenorhabditis elegans
Exon258320   128   X: 13750049-13750176 Caenorhabditis elegans
Exon258322   152   X: 13750228-13750379 Caenorhabditis elegans
Exon258324   166   X: 13750435-13750600 Caenorhabditis elegans
Exon258327   742   X: 13751056-13751797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.5a.1 13747315 13751797 1

1 Sequence

Length
2297

1 Sequence Ontology Term

Identifier Name Description
transcript