WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11E4.5b.1 Sequence Name  K11E4.5b.1
Length (nt)  1746   Chromosome Location  X: 13747447-13751369
Chromosome . Primary Identifier  X Chromosome Location . Start  13747447
Chromosome Location . End  13751369 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11E4.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003661 nhr-71 K11E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11E4.5b K11E4.5b 1746   X: 13747447-13747470

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.5b.1 13747447 13751369 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258336   24   X: 13747447-13747470 Caenorhabditis elegans
Exon258338   102   X: 13747855-13747956 Caenorhabditis elegans
Exon258339   118   X: 13748580-13748697 Caenorhabditis elegans
Exon258342   299   X: 13748791-13749089 Caenorhabditis elegans
Exon258344   336   X: 13749409-13749744 Caenorhabditis elegans
Exon258346   107   X: 13749792-13749898 Caenorhabditis elegans
Exon258348   128   X: 13750049-13750176 Caenorhabditis elegans
Exon258350   152   X: 13750228-13750379 Caenorhabditis elegans
Exon258352   166   X: 13750435-13750600 Caenorhabditis elegans
Exon258353   314   X: 13751056-13751369 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11E4.5b.1 13747447 13751369 1

1 Sequence

Length
1746

1 Sequence Ontology Term

Identifier Name Description
transcript