WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55F3.1.1 Sequence Name  F55F3.1.1
Length (nt)  1114   Chromosome Location  X: 13755771-13758962
Chromosome . Primary Identifier  X Chromosome Location . Start  13755771
Chromosome Location . End  13758962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010115 aakb-1 F55F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55F3.1 F55F3.1 810   X: 13755835-13755969

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55F3.1.1 13755771 13758962 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258329   199   X: 13755771-13755969 Caenorhabditis elegans
Exon258330   68   X: 13756844-13756911 Caenorhabditis elegans
Exon258332   229   X: 13757042-13757270 Caenorhabditis elegans
Exon258335   618   X: 13758345-13758962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55F3.1.1 13755771 13758962 1

1 Sequence

Length
1114

1 Sequence Ontology Term

Identifier Name Description
transcript