WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F55F3.2b Sequence Name  F55F3.2b
Length (nt)  1647   Chromosome Location  X: 13760310-13760421
Chromosome . Primary Identifier  X Chromosome Location . Start  13760310
Chromosome Location . End  13760421
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55F3.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31544 CEST-13, isoform b 61.4 548 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048520
WBRNAi00078350
WBRNAi00015740
WBRNAi00032884
WBRNAi00114803

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F55F3.2b 13760310 13760421 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010116 cest-13 F55F3.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F55F3.2b 13760310 13760421 1
CDS:F55F3.2b 13761042 13761241 1
CDS:F55F3.2b 13761300 13761642 1
CDS:F55F3.2b 13761687 13761838 1
CDS:F55F3.2b 13762446 13762644 1
CDS:F55F3.2b 13762690 13762886 1
CDS:F55F3.2b 13762937 13763045 1
CDS:F55F3.2b 13763301 13763460 1
CDS:F55F3.2b 13763772 13763946 1

1 Sequence

Length
1647

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F55F3.2b.1 F55F3.2b.1 1772   X: 13760237-13763998