WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1086.1b.1 Sequence Name  ZK1086.1b.1
Length (nt)  2727   Chromosome Location  X: 13798229-13803575
Chromosome . Primary Identifier  X Chromosome Location . Start  13798229
Chromosome Location . End  13803575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1086.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014215 obr-3 ZK1086.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1086.1b ZK1086.1b 2313   X: 13798639-13798800

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1086.1b.1 13798229 13803575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258407   572   X: 13798229-13798800 Caenorhabditis elegans
Exon258410   238   X: 13799160-13799397 Caenorhabditis elegans
Exon258412   272   X: 13799451-13799722 Caenorhabditis elegans
Exon258415   586   X: 13800263-13800848 Caenorhabditis elegans
Exon258417   188   X: 13800893-13801080 Caenorhabditis elegans
Exon258419   246   X: 13801648-13801893 Caenorhabditis elegans
Exon258421   75   X: 13801965-13802039 Caenorhabditis elegans
Exon258423   114   X: 13802176-13802289 Caenorhabditis elegans
Exon258425   90   X: 13802350-13802439 Caenorhabditis elegans
Exon258427   192   X: 13802906-13803097 Caenorhabditis elegans
Exon258428   154   X: 13803422-13803575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1086.1b.1 13798229 13803575 -1

1 Sequence

Length
2727

1 Sequence Ontology Term

Identifier Name Description
transcript