WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F19D8.1b.1 Sequence Name  F19D8.1b.1
Length (nt)  1332   Chromosome Location  X: 13817999-13823582
Chromosome . Primary Identifier  X Chromosome Location . Start  13817999
Chromosome Location . End  13823582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F19D8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006676 twk-23 F19D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F19D8.1b F19D8.1b 1332   X: 13817999-13818145

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F19D8.1b.1 13817999 13823582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258434   147   X: 13817999-13818145 Caenorhabditis elegans
Exon258438   146   X: 13818625-13818770 Caenorhabditis elegans
Exon258440   91   X: 13818970-13819060 Caenorhabditis elegans
Exon258442   175   X: 13819157-13819331 Caenorhabditis elegans
Exon258444   110   X: 13819377-13819486 Caenorhabditis elegans
Exon258446   83   X: 13819909-13819991 Caenorhabditis elegans
Exon258448   120   X: 13820281-13820400 Caenorhabditis elegans
Exon258450   166   X: 13820445-13820610 Caenorhabditis elegans
Exon258452   58   X: 13820663-13820720 Caenorhabditis elegans
Exon258454   154   X: 13820945-13821098 Caenorhabditis elegans
Exon258455   82   X: 13823501-13823582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F19D8.1b.1 13817999 13823582 -1

1 Sequence

Length
1332

1 Sequence Ontology Term

Identifier Name Description
transcript