WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.1k.2 Sequence Name  T21H8.1k.2
Length (nt)  3223   Chromosome Location  X: 13865055-13877583
Chromosome . Primary Identifier  X Chromosome Location . Start  13865055
Chromosome Location . End  13877583 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.1k.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1k T21H8.1k 2613   X: 13865539-13865577

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1k.2 13865055 13877583 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258499   523   X: 13865055-13865577 Caenorhabditis elegans
Exon258520   111   X: 13865744-13865854 Caenorhabditis elegans
Exon258537   189   X: 13865906-13866094 Caenorhabditis elegans
Exon258554   138   X: 13866400-13866537 Caenorhabditis elegans
Exon258571   707   X: 13866590-13867296 Caenorhabditis elegans
Exon258591   61   X: 13868032-13868092 Caenorhabditis elegans
Exon258605   127   X: 13868147-13868273 Caenorhabditis elegans
Exon258622   314   X: 13868448-13868761 Caenorhabditis elegans
Exon258639   246   X: 13868859-13869104 Caenorhabditis elegans
Exon258652   141   X: 13869748-13869888 Caenorhabditis elegans
Exon258667   114   X: 13870263-13870376 Caenorhabditis elegans
Exon258682   102   X: 13870431-13870532 Caenorhabditis elegans
Exon258710   188   X: 13876517-13876704 Caenorhabditis elegans
Exon258717   87   X: 13877266-13877352 Caenorhabditis elegans
Exon258731   175   X: 13877409-13877583 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.1k.2 13865055 13877583 -1

1 Sequence

Length
3223

1 Sequence Ontology Term

Identifier Name Description
transcript