WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21H8.3.1 Sequence Name  T21H8.3.1
Length (nt)  1095   Chromosome Location  X: 13897934-13900147
Chromosome . Primary Identifier  X Chromosome Location . Start  13897934
Chromosome Location . End  13900147 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21H8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005064 sra-38 T21H8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.3 T21H8.3 1095   X: 13897934-13898200

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.3.1 13897934 13900147 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258752   267   X: 13897934-13898200 Caenorhabditis elegans
Exon258753   202   X: 13898247-13898448 Caenorhabditis elegans
Exon258754   188   X: 13898921-13899108 Caenorhabditis elegans
Exon258756   127   X: 13899151-13899277 Caenorhabditis elegans
Exon258757   155   X: 13899786-13899940 Caenorhabditis elegans
Exon258758   156   X: 13899992-13900147 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21H8.3.1 13897934 13900147 -1

1 Sequence

Length
1095

1 Sequence Ontology Term

Identifier Name Description
transcript