WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.3.2 Sequence Name  R06C7.3.2
Length (nt)  1609   Chromosome Location  I: 7238993-7243967
Chromosome . Primary Identifier  I Chromosome Location . Start  7238993
Chromosome Location . End  7243967 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000963 dhp-1 R06C7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.3 R06C7.3 1470   I: 7239084-7239234

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.3.2 7238993 7243967 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18395   242   I: 7238993-7239234 Caenorhabditis elegans
Exon18398   65   I: 7240244-7240308 Caenorhabditis elegans
Exon18400   247   I: 7240439-7240685 Caenorhabditis elegans
Exon18402   66   I: 7240737-7240802 Caenorhabditis elegans
Exon18404   278   I: 7241250-7241527 Caenorhabditis elegans
Exon18406   212   I: 7241895-7242106 Caenorhabditis elegans
Exon18408   178   I: 7242185-7242362 Caenorhabditis elegans
Exon18410   181   I: 7242948-7243128 Caenorhabditis elegans
Exon18412   102   I: 7243662-7243763 Caenorhabditis elegans
Exon18413   38   I: 7243930-7243967 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.3.2 7238993 7243967 -1

1 Sequence

Length
1609

1 Sequence Ontology Term

Identifier Name Description
transcript