WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48F7.7.1 Sequence Name  F48F7.7.1
Length (nt)  1223   Chromosome Location  X: 13979069-13980517
Chromosome . Primary Identifier  X Chromosome Location . Start  13979069
Chromosome Location . End  13980517 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48F7.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009852 arrd-24 F48F7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48F7.7 F48F7.7 1041   X: 13979240-13979719

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48F7.7.1 13979069 13980517 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon258911   651   X: 13979069-13979719 Caenorhabditis elegans
Exon258912   110   X: 13979765-13979874 Caenorhabditis elegans
Exon258913   163   X: 13979918-13980080 Caenorhabditis elegans
Exon258914   106   X: 13980175-13980280 Caenorhabditis elegans
Exon258915   193   X: 13980325-13980517 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48F7.7.1 13979069 13980517 -1

1 Sequence

Length
1223

1 Sequence Ontology Term

Identifier Name Description
transcript