WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R06C7.8.1 Sequence Name  R06C7.8.1
Length (nt)  3062   Chromosome Location  I: 7251941-7255223
Chromosome . Primary Identifier  I Chromosome Location . Start  7251941
Chromosome Location . End  7255223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06C7.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R06C7.8 R06C7.8 2964   I: 7251947-7252020

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.8.1 7251941 7255223 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon18445   80   I: 7251941-7252020 Caenorhabditis elegans
Exon18446   530   I: 7252066-7252595 Caenorhabditis elegans
Exon18447   912   I: 7252639-7253550 Caenorhabditis elegans
Exon18448   188   I: 7253595-7253782 Caenorhabditis elegans
Exon18449   770   I: 7253828-7254597 Caenorhabditis elegans
Exon18450   582   I: 7254642-7255223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R06C7.8.1 7251941 7255223 1

1 Sequence

Length
3062

1 Sequence Ontology Term

Identifier Name Description
transcript